miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|122032943|gb|EH421808.1|EH421808 GGGCACAATGACAACCACTCACTCATACACTGGTGACCAGAGGCTGTTGGATGCAAGCCACCGTGATCTAAGGAGAGCAA
GAGCAGCTGCTTTAAACATCGTTCCAACATCAACAGGAGCAGCTAAAGCCGTGGCTCTTGTCCTCCCTAACCTCAAAGGA
AAGCTCAACGGCATCGCATTGCGTGTGCCAACTCCCAACGTCTCGGTGGTTGACTTAGTTGTGCAAGTCTCCAAGAAGAC
TTTTGCTGAAGAAGTCAACGCTGCGTTCAGGGATGCAGCTGCGAACGAGCTTAAAGGTATACTCGATGTCTGCGATGAGC
CTCTTGTC




Most similar to sp|P09672|G3PA_SINAL

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P09672|G3PA_SINAL Glyceraldehyde-3-phosphate dehydrogenase A,
           chloroplastic (Fragment) OS=Sinapis alba GN=GAPA PE=2
           SV=1
          Length = 233

 Score =  147 bits (371), Expect = 2e-35
 Identities = 79/109 (72%), Positives = 79/109 (72%)
 Frame = +2

Query: 2   GTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKAVALVLPNLKGKLNGIAL 181
           GTMTTTHSYTGDQ                  NIVPTSTGAAKAVALVLPNLKGKLNGIAL
Sbjct: 71  GTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIAL 130

Query: 182 RVPTPNXXXXXXXXXXSKKTFAEEVNAAFRDAAANELKGILDVCDEPLV 328
           RVPTPN          SKKTFAEEVNAAFRDAA  ELKGILDVCDEPLV
Sbjct: 131 RVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDAAEKELKGILDVCDEPLV 179